Peer-Reviewed Publications

Our full list of publications.

Prof. Sansone's Google Scholar profile.

Selected past and recent publications

  1. Maxwell L, Shreedhar P, Dauga D, et al. FAIR, ethical, and coordinated data sharing for COVID-19 response: a scoping review and cross-sectional survey of COVID-19 data sharing platforms and registries. Lancet Digital Health. 2023 Oct;5(10):e712-e736. doi:10.1016/s2589-7500(23)00129-2
  2. Rocca-Serra P, Gu W, Ioannidis V, et al. The FAIR Cookbook - the essential resource for and by FAIR doers. Scientific Data. 2023 May 19;10(1):292. doi:10.1038/s41597-023-02166-3
  3. Welter D, Rocca-Serra P, Grouès V, et al. The Translational Data Catalog - discoverable biomedical datasets. Scientific Data. 2023 Jul 20;10(1):470. doi:10.1038/s41597-023-02258-0
  4. Welter D, Juty N, Rocca-Serra P, et al. FAIR in action - a flexible framework to guide FAIRification. Scientific Data. 2023 May 19;10(1):291. doi:10.1038/s41597-023-02167-2
  5. Batista D, Gonzalez-Beltran A, Sansone SA, Rocca-Serra P. Machine actionable metadata models. Scientific Data. 2022 Sep 30;9(1):592. doi:10.1038/s41597-022-01707-6
  6. Mirzayi C, Renson A; Genomic Standards Consortium; Massive Analysis and Quality Control Society, et al. Reporting guidelines for human microbiome research: the STORMS checklist. Nature Medicine. 2021 Nov;27(11):1885-1892. doi:10.1038/s41591-021-01552-x
    7. Lee G, Bacon S, Bush I, et al. Barely sufficient practices in scientific computing. Patterns. 2021 Feb 12;2(2):100206. doi:10.1016/j.patter.2021.100206
  7. Rocca-Serra P, Sansone SA. Experiment design driven FAIRification of omics data matrices, an exemplar. Sci Data. 2019 Dec 12;6(1):271. doi:10.1038/s41597-019-0286-0
  8. Viant MR, Ebbels TMD, Beger RD, et al. Use cases, best practice and reporting standards for metabolomics in regulatory toxicology. Nature Communications 10, 3041 (2019). doi:10.1038/s41467-019-10900-y
  9. Amann RI, Baichoo S, Blencowe BJ, et al. Toward unrestricted use of public genomic data. Science 2019 Jan 25;363(6425):350-352. doi:10.1126/science.aaw1280
  10. Sansone SA, McQuilton P, Rocca-Serra P, et al. FAIRsharing, a cohesive community approach to the growth in standards, repositories and policies. Nat Biotech. 2019 April 37;358-367. doi:10.1038/s41587-019-0080-8.
  11. Wilkinson MD, Dumontier M, Sansone SA, et al. Evaluating FAIR maturity through a scalable, automated, community-governed framework. Sci Data. 2019 Sep 20;6(1):174. doi:10.1038/s41597-019-0184-5
  12. Wilkinson MD, Sansone SA, Schultes E, et al. A design framework and exemplar metrics for FAIRness. Sci Data 2018 Jun 26;5. doi:10.1038/sdata.2018.118
  13. Ohno-Machado L, Sansone SA, Alter G, et al. DataMed: Finding useful data across multiple biomedical data repositories. Nat Genet. 2017 May 26;49(6):816-819. doi:10.1038/ng.3864.
  14. Wilkinson MD, Dumontier M, Aalbersberg IJ, et al. The FAIR Guiding Principles for scientific data management and stewardship. Sci Data 2016 Mar 15;3. doi:10.1038/sdata.2016.18.
  15. Baker NA, Klemm JD, Harper SL, et al. Standardizing data. Nat Nanotechnol. 2013 Feb;8(2). doi:10.1038/nnano.2013.12.
  16. Sansone SA*, Rocca-Serra P*, Field D, et al. Toward interoperable bioscience data. Nat Genet. 2012 Jan 27;44(2). doi:10.1038/ng.1054.
  17. Field D*, Sansone SA*, Collis A*, et al. Megascience. 'Omics data sharing. Science. 2009 Oct 9;326(5950). doi:10.1126/science.1180598. The * indicates co-first authors.
  18. Taylor CF*, Field D*, Sansone SA*, et al. Promoting coherent minimum reporting guidelines for biological and biomedical investigations: the MIBBI project. Nat Biotechnol. 2008 Aug;26(8). doi:10.1038/nbt.1411. The * indicates co-first and corresponding authors.
  19. Smith B, Ashburner M, Rosse C, et al. The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration. Nat Biotechnol. 2007 Nov;25(11). doi:10.1038/nbt1346.

Invited expert reports, impacting on funders’ data policy